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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792210.1_cds_XP_016511116.1_2313
CDS Infomation

[gene=LOC107828338] [db_xref=GeneID:107828338] [protein=NADP-dependent malic enzyme, chloroplastic-like] [protein_id=XP_016511116.1] [location=complement(join(7054..7142,7245..7373,8573..8663,8749..8823,8948..9059,9142..9155,9255..9308,9429..9476,9591..9689,9793..9878,9959..10028,10131..10226,10328..10393,10602..10707,10802..10953,11168..11242,11359..11479,12269..12546,12668..12697))] [gbkey=CDS]
Sequence

ATGTTCTCATTGAACGGAAGCAGTTGTACGAACAATTCGGTATCTGGGGTTTCAAGATGT
TTGACTCAGTCTCGGAAAAGGATGTCAGTTCCAATGGTGGCGGTGGCGTCTGTGAGCTCA
AATGTCAAGCCCGGAGAGCGGCATGCAAGTGTTTTAATGGAGAATACTTTGAAGGAGATG
AAGGAAAGTGCTCCAGTTATTGAGAAAGATTCAAAATCGGCGGTCAGTGGAGGAGTCGGC
GACGTCTACGGCGAGGATAGTGCCACTGAAGATCAAACTATTACCCCTTGGACTCACTCT
GTTGCTAGCGGATACTCATTGTTGCGTGATCCAAACTACAACAAAGGGCTTGCATTCAGT
GAGAAAGAAAGGGATTCCCACTATTTGCGTGGTCTTCTTCCTCCTGTAGTTGTTGATCAG
GAGCTTCAGGTTGAGAAATTGATGAAAAATCTGCGTCAGTATGATGTACCACTGCAAAGG
TACATAGCTATGATGGATCTTCAGGAGAGAAATGAAAGGCTATTCTACAAGCTTCTCATG
GAAAACGTAGAAGAGCTGCTCCCGGTAGTTTATACACCAACAGTAGGCGAAGCATGCCAG
AAGTATGGTAGCATCTTCAGACGTCCTCAAGGTCTTTTTATCAGCTTGAAAGAAAAAGGT
AAAATTCTTGAGGTATTAAAGAATTGGCCTGAGAAGAAAATTCAAGTAATCGTTGTAACT
GATGGAGAACGAATATTAGGCCTTGGGGACCTAGGTTGCCAGGGAATGGGAATACCTGTG
GGGAAACTCTCTTTATACACCGCTCTTGGAGGCGTTCGGCCGTCAGCTTGCTTGCCGATA
ACCATTGATGTGGGCACAAACAATGAGAAATTGTTGAAAGATGAATTTTACATTGGGCTC
AGGCAAAGAAGAGCTAGAGGACAGGAATATGCTGAACTCCTGGATGAATTTATGTCTGCT
GTCAAGCAGAATTACGGCGAGAAAGTGCTCATTCAATTTGAAGACTTCGCGAATCATAAC
GCATTTGACCTTCTTGCAAAGTACGGAACTAGCCACCTTGTTTTCAATGATGACATTCAG
GGGACAGCATCTGTGGTCCTTGCAGGGCTCATGTCAGCACTAAACTTGGTGGGAGGAACC
TTAGCAGAGAATACATTTTTATTCCTGGGAGCTGGAGAGGCTGGTAGTGGGATAGCAGAA
CTCATAGCTCTTGAGATGTCAAAGCAGACTGGAGCCCCTCCAGAAGAGACGCGTAAGAAA
ATTTGGATGGTGGATTCTAAGGGGTTGATTGTTAGAGTAACTTACTGTTCTAAATGTTTT
GCAATGCAGAAACCAATTATTTTTGCTCTCTCCAACCCAACATCACAGTCTGAATGTACT
GCTGAAGAGGCTTATACATGGAGTAATGGCCGAGCCATTTTTGCTAGCGGGAGTCCATTT
GCTCCTGTTGAGTACAAGGGGAAAGTCTTCGTGTCTGGCCAGGCAAATAATGCATATATC
TTTCCTGGGCTTGGTCTGGGACTGCTAATTTCCGGTGCAATTCGCGTTCATGACGACATA
CTCCTGGCAGCCTCGGAAGCATTAGCAGCAGAAGTTAGTCAAGAGAACTTTGAGAAGGGA
CTAATATACCCACCATTTTCGAACATAAGAAAGATTTCAGCTCACATTGCTGCCAAGGTG
GCAGCCAAAGCATATGAACTAGGTTTGGCCACTCGTCTACCGCAACCTGAGAACCTAGTG
GCATATGCTGAGAGTTGCATGTACAGTCCAAGTTACCGTAGCTATCGCTAG

Peptide Sequence

PEP ID

XP_016511116.1
PEP Infomation

PREDICTED: NADP-dependent malic enzyme, chloroplastic-like [Nicotiana tabacum]
Sequence

MFSLNGSSCTNNSVSGVSRCLTQSRKRMSVPMVAVASVSSNVKPGERHASVLMENTLKEM
KESAPVIEKDSKSAVSGGVGDVYGEDSATEDQTITPWTHSVASGYSLLRDPNYNKGLAFS
EKERDSHYLRGLLPPVVVDQELQVEKLMKNLRQYDVPLQRYIAMMDLQERNERLFYKLLM
ENVEELLPVVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVT
DGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLKDEFYIGL
RQRRARGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQ
GTASVVLAGLMSALNLVGGTLAENTFLFLGAGEAGSGIAELIALEMSKQTGAPPEETRKK
IWMVDSKGLIVRVTYCSKCFAMQKPIIFALSNPTSQSECTAEEAYTWSNGRAIFASGSPF
APVEYKGKVFVSGQANNAYIFPGLGLGLLISGAIRVHDDILLAASEALAAEVSQENFEKG
LIYPPFSNIRKISAHIAAKVAAKAYELGLATRLPQPENLVAYAESCMYSPSYRSYR

Transcript Sequence

Gene sequence data has not been registered.